mTOR inhibition reverses Akt-dependent prostate intraepithelial neoplasia via regulation of apoptotic and Hif1-dependent pathways
Pradip K. Majumder, Phillip G. Febbo, Rachel Bikoff, Raanan Berger, Qi Xue, Louis M. McMahon, Judith Manola, James Brugarolas, Timothy J. McDonnell, Todd R. Golub,
Massimo Loda, Heidi A. Lane & William R. Sellers

Nature Medicine 2004 (in press)

Download

Manuscript pdf file

News and Views

Bcl2 genotyping protocol

DNA extraction protocol from ear punch

RNA isolation protocol

Download Expression Data from GEO accession number GSE1413

 

 

 

EGFR Mutations in Lung Cancer: Correlation with Clinical Response to Gefitinib Therapy


J. Guillermo Paez*, Pasi A. Jänne,*, Jeffrey C. Lee,*, Sean Tracy, Heidi Greulich, Stacey Gabriel, Paula Herman, Frederic J. Kaye, Neal Lindeman, Titus J. Boggon, Katsuhiko Naoki,
Hidefumi Sasaki, Yoshitaka Fujii, Michael J. Eck,
William R. Sellers#, Bruce E. Johnson#, Matthew Meyerson#

* co-first authors

# co-corresponding authors

Science 2004 (in press)

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Manuscript pdf file

Table S2 EGFR mutations

Table S3 EGFR mutations/Iressa response

Chromatograms

Nat Med News and Views

Cancer Cell Review

 

 

 


A library of siRNA duplexes targeting the phosphoinositide 3-kinase pathway: determinants of gene silencing for use in cell-based screens


Andrew C. Hsieh, Ronghai Bo, Judith Manola, Francisca Vazquez, Olivia Bare, Anastasia Khvorova, Stephen Scaringe and William R. Sellers

Nucleic Acids Research 2004; 32, 893-901

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Manuscript pdf file

Supplemental Table I

Supplemental Table II

Supplemental Table III

Knockdown data linked to gene and siRNA oligo information (excel format)

 

 


A chemical genetic screen identifies inhibitors of regulated nuclear export of a Forkhead transciption factor in PTEN-deficient tumor cells

Tweeny R. Kau, Frank Schroeder, Shivapryia Ramaswamy, Cheryl L. Wojciechowski, Jean J. Zhao, Thomas M. Roberts, Jon Clardy, William R. Sellers and Pamela A. SIlver

Cancer Cell 2003; 4, 463-476pdf

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Manuscript pdf file

Mini-review

Mini-review Wang and El-Deiry

 

 


Genome-wide loss-of-heterozygosity analysis from laser-capture microdissected prostate cancer using SNP arrays and a novel bioinformatics platform dChipSNP

Marshal E. Lieberfarb*, Ming Lin*, Mirna Lechpammer, Cheng Li, David M. Tanenbaum, Philip Febbo, Rene Wright, Judy Shim, Philip W. Kantoff, Massimo Loda, Matthew Meyerson and William R. Sellers

*contributed equally

Cancer Res 2003; 63, 4781-4785 pdf

Supporting Material

Supp. Figure 1A

Supp. Figure 1B

Supp. Figure 1C

Supp. Figure 1D

Supp. Figure 1E

Supp. Figure 1F

Supp. Figure 1 Legend

Supplemental Table I

Summary LOH Data

Raw Data Files

(in progress)

Links for dCHIP

http://www.dchip.org/

dCHIP lab page


Prostate intraepithelial neoplasia induced by prostate restricted Akt activation – the MPAKT model

Pradip K. Majumder*, Jen Jen Yeh*, Daniel J. George, Phillip G. Febbo, Jennifer Kum, Xi Que, Rachel Bikoff, Hongfeng Ma, Philip W. Kantoff, Todd R. Golub, Massimo Loda, William R. Sellers

Now Available from the MMHC Repository click here

*contributed equally

PNAS 2003; 100:7841-7846 pdf

Supporting Material
Supporting Figure 6 : Legend
Supporting Figure 7 : Legend
Supporting Figure 8 : Legend
Supporting Table 1
Supporting Table 2
Supporting Table 3
Supporting Table 4


Raw Data (CEL) Files
1 2 3 4 5 6 7 8

Other Data Files

Genes Ranked by the Signal-to-Noise Metric

Supplemental Methods

MPAKT genotyping protocol


Tissue dissection and processing


Tail DNA extraction protocol


A novel mechanism of gene regulation and tumor suppression by the transcription factor FKHR

Shivapriya Ramaswamy*, Noriaki Nakamura*, Isabelle Sansal, Louise Bergeron, William R. Sellers

*contributed equally

Cancer Cell 2002, 2(1): 81-91 pdf

Supplemental Information

Supplemental Information
Supplemental Figure 1
Supplemental Figure 2

Experimental Data

Experiment 1 download data
Experiment 2 download data
Experiment 3 download data


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